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- 3did abstract "The database of three-dimensional interacting domains (3did) is a biological database containing a catalogue of protein-protein interactions for which a high-resolution 3D structure is known. 3did collects and classifies all structural models of domain-domain interactions in the Protein Data Bank, providing molecular details for such interactions. 3did uses the Pfam database to define the position of protein domains in the protein structures. 3did was first published in 2005. The current version also includes a pipeline for the discovery and annotation of novel domain-motif interactions. For every interaction 3did identifies and groups different binding modes by clustering similar interfaces into “interaction topologies”. By maintaining a constantly updated collection of domain-based structural interaction templates, 3did is a reference source of information for the structural characterization of protein interaction networks. 3did is updated every six months and is available for bulk download and for browsing at http://3did.irbbarcelona.org.".
- 3did thumbnail Database.png?width=300.
- 3did title "3did".
- 3did wikiPageExternalLink 3did.irbbarcelona.org.
- 3did wikiPageID "31656862".
- 3did wikiPageLength "3364".
- 3did wikiPageOutDegree "12".
- 3did wikiPageRevisionID "678223251".
- 3did wikiPageWikiLink Biological_database.
- 3did wikiPageWikiLink Category:Biological_databases.
- 3did wikiPageWikiLink Category:Protein_structure.
- 3did wikiPageWikiLink Domain_(biology).
- 3did wikiPageWikiLink Pfam.
- 3did wikiPageWikiLink Protein_Data_Bank.
- 3did wikiPageWikiLink Protein_domain.
- 3did wikiPageWikiLink Protein_structure.
- 3did wikiPageWikiLink Protein–protein_interaction.
- 3did wikiPageWikiLink File:Database.png.
- 3did author "Amelie Stein".
- 3did description "identification and classification of domain-based interactions of known three-dimensional structure.".
- 3did laboratory "Institute for Research in Biomedicine, Barcelona, Spain.".
- 3did logo File:Database.png.
- 3did pmid "Stein & al.".
- 3did released "2010".
- 3did title "3".
- 3did url 3did.irbbarcelona.org.
- 3did wikiPageUsesTemplate Template:Biodatabase-stub.
- 3did wikiPageUsesTemplate Template:Infobox_biodatabase.
- 3did wikiPageUsesTemplate Template:Orphan.
- 3did description "identification and classification ofdomain-based interactions of knownthree-dimensional structure.".
- 3did subject Category:Biological_databases.
- 3did subject Category:Protein_structure.
- 3did hypernym Database.
- 3did type BiologicalDatabase.
- 3did type Database.
- 3did type Work.
- 3did type Biophysic.
- 3did type CreativeWork.
- 3did type InformationObject.
- 3did type Thing.
- 3did type Q386724.
- 3did comment "The database of three-dimensional interacting domains (3did) is a biological database containing a catalogue of protein-protein interactions for which a high-resolution 3D structure is known. 3did collects and classifies all structural models of domain-domain interactions in the Protein Data Bank, providing molecular details for such interactions. 3did uses the Pfam database to define the position of protein domains in the protein structures. 3did was first published in 2005.".
- 3did label "3did".
- 3did sameAs Q4636605.
- 3did sameAs m.0gmgx3p.
- 3did sameAs Q4636605.
- 3did wasDerivedFrom 3did?oldid=678223251.
- 3did depiction Database.png.
- 3did homepage 3did.irbbarcelona.org.
- 3did isPrimaryTopicOf 3did.