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- Resolution_by_Proxy abstract "Resolution by Proxy (ResProx) is a method for assessing the equivalent X-ray resolution of NMR-derived protein structures. ResProx calculates resolution from coordinate data rather than from electron density or other experimental inputs. This makes it possible to calculate the resolution of a structure regardless of how it was solved (X-ray, NMR, EM, modeling, ab initio prediction). ResProx was originally designed to serve as a simple, single-number evaluation that allows straightforward comparison between the quality/resolution of X-ray structures and the quality of a given NMR structure. However, it can also be used to assess the reliability of an experimentally reported X-ray structure resolution, to evaluate protein structures solved by unconventional or hybrid means and to identify fraudulent structures deposited in the PDB. ResProx incorporates more than 25 different structural features to determine a single resolution-like value. ResProx values are reported in Angstroms. Tests on thousands of X-ray structures show that ResProx values match very closely to resolution values reported by X-ray crystallographers. Resolution-by-proxy values can be calculated for newly determined protein structures using a freely accessible ResProx web server. This server accepts protein coordinate data (in PDB format) and generates a resolution estimate (in Angstroms) for that input structure.".
- Resolution_by_Proxy thumbnail Proxy_logo.png?width=300.
- Resolution_by_Proxy title "Resolution by Proxy".
- Resolution_by_Proxy wikiPageExternalLink download.html.
- Resolution_by_Proxy wikiPageID "42471468".
- Resolution_by_Proxy wikiPageLength "9790".
- Resolution_by_Proxy wikiPageOutDegree "72".
- Resolution_by_Proxy wikiPageRevisionID "621462727".
- Resolution_by_Proxy wikiPageWikiLink Ab_initio_structure_prediction.
- Resolution_by_Proxy wikiPageWikiLink Carbon.
- Resolution_by_Proxy wikiPageWikiLink Coordinate.
- Resolution_by_Proxy wikiPageWikiLink Coordinate_system.
- Resolution_by_Proxy wikiPageWikiLink De_novo_protein_structure_prediction.
- Resolution_by_Proxy wikiPageWikiLink Hydrogen_atom.
- Resolution_by_Proxy wikiPageWikiLink Hydrogen_atoms.
- Resolution_by_Proxy wikiPageWikiLink Mean_absolute_error.
- Resolution_by_Proxy wikiPageWikiLink NMR.
- Resolution_by_Proxy wikiPageWikiLink Nitrogen.
- Resolution_by_Proxy wikiPageWikiLink Nuclear_magnetic_resonance.
- Resolution_by_Proxy wikiPageWikiLink Oxygen.
- Resolution_by_Proxy wikiPageWikiLink Protein_Data_Bank.
- Resolution_by_Proxy wikiPageWikiLink Protein_structure.
- Resolution_by_Proxy wikiPageWikiLink RMSD.
- Resolution_by_Proxy wikiPageWikiLink Root-mean-square_deviation.
- Resolution_by_Proxy wikiPageWikiLink X-ray.
- Resolution_by_Proxy wikiPageWikiLink X-ray_crystallography.
- Resolution_by_Proxy wikiPageWikiLink File:Proxy_fig1.png.
- Resolution_by_Proxy wikiPageWikiLink File:Proxy_fig2.png.
- Resolution_by_Proxy wikiPageWikiLink File:Proxy_logo.png.
- Resolution_by_Proxy wikiPageWikiLinkText "Resolution by Proxy".
- Resolution_by_Proxy center "University of Alberta".
- Resolution_by_Proxy curation "Manually curated".
- Resolution_by_Proxy description "Calculates structure resolution using coordinate data only".
- Resolution_by_Proxy format "Data Input: X-ray or NMR coordinates ; Data Output: Estimated resolution in Angstroms".
- Resolution_by_Proxy frequency "-6.31152E7".
- Resolution_by_Proxy hasPhotoCollection Resolution_by_Proxy.
- Resolution_by_Proxy laboratory "Dr. David Wishart".
- Resolution_by_Proxy logo "150".
- Resolution_by_Proxy title "Resolution by Proxy".
- Resolution_by_Proxy url download.html.
- Resolution_by_Proxy wikiPageUsesTemplate Template:Infobox_biodatabase.
- Resolution_by_Proxy wikiPageUsesTemplate Template:Reflist.
- Resolution_by_Proxy description "Calculates structure resolution using coordinate data only".
- Resolution_by_Proxy hypernym Method.
- Resolution_by_Proxy type BiologicalDatabase.
- Resolution_by_Proxy type Database.
- Resolution_by_Proxy type Software.
- Resolution_by_Proxy type Work.
- Resolution_by_Proxy type CreativeWork.
- Resolution_by_Proxy type InformationObject.
- Resolution_by_Proxy type Thing.
- Resolution_by_Proxy type Q386724.
- Resolution_by_Proxy comment "Resolution by Proxy (ResProx) is a method for assessing the equivalent X-ray resolution of NMR-derived protein structures. ResProx calculates resolution from coordinate data rather than from electron density or other experimental inputs. This makes it possible to calculate the resolution of a structure regardless of how it was solved (X-ray, NMR, EM, modeling, ab initio prediction).".
- Resolution_by_Proxy label "Resolution by Proxy".
- Resolution_by_Proxy sameAs m.010fjksr.
- Resolution_by_Proxy sameAs Q17152903.
- Resolution_by_Proxy sameAs Q17152903.
- Resolution_by_Proxy wasDerivedFrom Resolution_by_Proxy?oldid=621462727.
- Resolution_by_Proxy depiction Proxy_logo.png.
- Resolution_by_Proxy isPrimaryTopicOf Resolution_by_Proxy.