Matches in DBpedia 2016-04 for { <http://dbpedia.org/resource/UCLUST> ?p ?o }
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- UCLUST abstract "UCLUSTis an algorithm designed to cluster nucleotide or amino-acid sequences into clusters basedon sequence similarity. The algorithm was published in 2010 and implemented in a program also named UCLUST.The algorithm is described by the author as following two simple clustering criteria, in regard to therequested similarity threshold T. The first criterion states that any given cluster's centroid sequencewill have a similarity smaller than T to any other clusters' centroid sequence. The second criterion statesthat each member sequence in a given cluster will have similarity to the cluster'scentroid sequence that is equal or greater than T.UCLUST algorithm is a greedy one. As a result, the order of the sequences in the input file will havean impact on the resulting clusters and their quality. For this reason, it's advised that the sequenceswill be sorted before entering clustering stage. The program UCLUST is equipped with some options tosort the input sequences prior to clustering them.UCLUST program is widely utilized among the bioinformatic research community, where it used for multipleapplications including OTU assignment (e.g. 16s), creating non-redundant gene catalogs, taxonomic assignmentand phylogenetic analysis.".
- UCLUST wikiPageExternalLink uclust_algo.html.
- UCLUST wikiPageExternalLink uclust.html.
- UCLUST wikiPageID "45704921".
- UCLUST wikiPageLength "2129".
- UCLUST wikiPageOutDegree "5".
- UCLUST wikiPageRevisionID "671982676".
- UCLUST wikiPageWikiLink Algorithm.
- UCLUST wikiPageWikiLink Category:2010_software.
- UCLUST wikiPageWikiLink Category:Bioinformatics_algorithms.
- UCLUST wikiPageWikiLink Category:Metagenomics.
- UCLUST wikiPageWikiLink Sequence_clustering.
- UCLUST wikiPageWikiLinkText "UCLUST".
- UCLUST wikiPageUsesTemplate Template:Cite_web.
- UCLUST wikiPageUsesTemplate Template:Reflist.
- UCLUST wikiPageUsesTemplate Template:Underlinked.
- UCLUST subject Category:2010_software.
- UCLUST subject Category:Bioinformatics_algorithms.
- UCLUST subject Category:Metagenomics.
- UCLUST comment "UCLUSTis an algorithm designed to cluster nucleotide or amino-acid sequences into clusters basedon sequence similarity. The algorithm was published in 2010 and implemented in a program also named UCLUST.The algorithm is described by the author as following two simple clustering criteria, in regard to therequested similarity threshold T. The first criterion states that any given cluster's centroid sequencewill have a similarity smaller than T to any other clusters' centroid sequence.".
- UCLUST label "UCLUST".
- UCLUST sameAs Q21161163.
- UCLUST sameAs m.0130n0j2.
- UCLUST sameAs Q21161163.
- UCLUST wasDerivedFrom UCLUST?oldid=671982676.
- UCLUST isPrimaryTopicOf UCLUST.