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- TargetScan abstract "In bioinformatics, TargetScan is a web server that predicts biological targets of microRNAs (miRNAs) by searching for the presence of sites that match the seed region of each miRNA. For many species, other types of sites, known as 3’-compensatory sites are also identified. These miRNA target predictions are regularly updated and improved by the laboratory of David Bartel in conjunction with the Whitehead Institute Bioinformatics and Research Computing Group.TargetScan includes TargetScanHuman, TargetScanMouse, TargetScanFish, TargetScanFly, and TargetScanWorm. which provide predictions for mammals, zebrafish, insects, and nematodes centered on the genes of human, mouse, zebrafish, Drosophila melanogaster, and Caenorhabditis elegans, respectively.Compared to other target-prediction tools TargetScan provides accurate rankings of the predicted targets for each miRNA. These rankings are based on either the probability of evolutionarily conserved targeting (PCT scores.) or the predicted efficacy of repression (context++ scores).Another distinguishing featureTemplate:Compared to? of TargetScan is its use of extra mRNA annotations. In particular, TargetScanWorm and TargetScanFish are based on C. elegans and zebrafish mRNA models for which 3’ untranslated regions (3’ UTRs) are defined using polyadenylation sites that are experimentally determined using accurate high-throughput methods.".
- TargetScan title "TargetScan".
- TargetScan wikiPageExternalLink www.mirbase.org.
- TargetScan wikiPageExternalLink www.targetscan.org.
- TargetScan wikiPageExternalLink www.targetscan.org.
- TargetScan wikiPageExternalLink bartellab.wi.mit.edu.
- TargetScan wikiPageID "41328412".
- TargetScan wikiPageLength "7120".
- TargetScan wikiPageOutDegree "16".
- TargetScan wikiPageRevisionID "676787774".
- TargetScan wikiPageWikiLink Bioinformatics.
- TargetScan wikiPageWikiLink Caenorhabditis_elegans.
- TargetScan wikiPageWikiLink Category:Bioinformatics.
- TargetScan wikiPageWikiLink Category:MicroRNA.
- TargetScan wikiPageWikiLink Category:Servers_(computing).
- TargetScan wikiPageWikiLink David_Bartel.
- TargetScan wikiPageWikiLink Drosophila_melanogaster.
- TargetScan wikiPageWikiLink MicroRNA.
- TargetScan wikiPageWikiLink Polyadenylation.
- TargetScan wikiPageWikiLink Three_prime_untranslated_region.
- TargetScan wikiPageWikiLink Whitehead_Institute.
- TargetScan wikiPageWikiLink Zebrafish.
- TargetScan wikiPageWikiLinkText "TargetScan".
- TargetScan description MicroRNA.
- TargetScan laboratory "David Bartel Lab".
- TargetScan title "TargetScan".
- TargetScan url www.targetscan.org.
- TargetScan wikiPageUsesTemplate Template:Citation_needed.
- TargetScan wikiPageUsesTemplate Template:Compared_to%3F.
- TargetScan wikiPageUsesTemplate Template:Infobox_biodatabase.
- TargetScan wikiPageUsesTemplate Template:Reflist.
- TargetScan wikiPageUsesTemplate Template:Which.
- TargetScan description "microRNAs".
- TargetScan subject Category:Bioinformatics.
- TargetScan subject Category:MicroRNA.
- TargetScan subject Category:Servers_(computing).
- TargetScan hypernym Server.
- TargetScan type BiologicalDatabase.
- TargetScan type Database.
- TargetScan type Software.
- TargetScan type Work.
- TargetScan type CreativeWork.
- TargetScan type InformationObject.
- TargetScan type Thing.
- TargetScan type Q386724.
- TargetScan comment "In bioinformatics, TargetScan is a web server that predicts biological targets of microRNAs (miRNAs) by searching for the presence of sites that match the seed region of each miRNA. For many species, other types of sites, known as 3’-compensatory sites are also identified.".
- TargetScan label "TargetScan".
- TargetScan sameAs Q18387989.
- TargetScan sameAs m.010hkgdz.
- TargetScan sameAs Q18387989.
- TargetScan wasDerivedFrom TargetScan?oldid=676787774.
- TargetScan homepage www.targetscan.org.
- TargetScan isPrimaryTopicOf TargetScan.