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- MatrixDB abstract "MatrixDB is a biological database focused on interactions established by extracellular proteins and polysaccharides. MatrixDB takes into account the multimeric nature of the extracellular proteins (for example, collagens, laminins and thrombospondins are multimers). The database was initially released in 2009 and is maintained by the research group of Sylvie Ricard-Blum at BMSSI UMR5086, Claude Bernard University Lyon 1.MatrixDB is linked with UniGene and the Human Protein Atlas. It also allows users to build customised tissue- and disease-specific interaction networks, which can be further analysed and visualised using Cytoscape or Medusa.MatrixDB is an active member of the International Molecular Exchange Consortium (IMEx), a group of the major public providers of interaction data. Other participating databases include the Biomolecular Interaction Network Database (BIND), IntAct, the Molecular Interaction Database (MINT), MIPS, MPact, and BioGRID. The databases of IMEx work together to prevent duplications of effort, collecting data from non-overlapping sources and sharing the curated interaction data. The IMEx consortium also worked to develop the HUPO-PSI-MI XML standard format for annotating and exchanging interaction data. MatrixDB includes interaction data extracted from the literature by manual curation and offers access to relevant data involving extracellular proteins provided by IMEx partner databases through the PSICQUIC webservice, as well as data from the Human Protein Reference Database.".
- MatrixDB thumbnail Database.png?width=300.
- MatrixDB title "MatrixDB".
- MatrixDB wikiPageExternalLink matrixdb.ibcp.fr.
- MatrixDB wikiPageExternalLink -Interactions-hote-pathogene-S-.
- MatrixDB wikiPageID "30339439".
- MatrixDB wikiPageLength "7787".
- MatrixDB wikiPageOutDegree "17".
- MatrixDB wikiPageRevisionID "699805380".
- MatrixDB wikiPageWikiLink BioGRID.
- MatrixDB wikiPageWikiLink Category:Biological_databases.
- MatrixDB wikiPageWikiLink Category:Polysaccharides.
- MatrixDB wikiPageWikiLink Claude_Bernard_University_Lyon_1.
- MatrixDB wikiPageWikiLink Cytoscape.
- MatrixDB wikiPageWikiLink Extracellular.
- MatrixDB wikiPageWikiLink Human_Protein_Atlas.
- MatrixDB wikiPageWikiLink Human_Protein_Reference_Database.
- MatrixDB wikiPageWikiLink Human_Proteome_Organization.
- MatrixDB wikiPageWikiLink International_Molecular_Exchange.
- MatrixDB wikiPageWikiLink PSI-MI.
- MatrixDB wikiPageWikiLink Polysaccharide.
- MatrixDB wikiPageWikiLink Protein.
- MatrixDB wikiPageWikiLink Proteomics_Standards_Initiative.
- MatrixDB wikiPageWikiLink UniGene.
- MatrixDB wikiPageWikiLink File:Database.png.
- MatrixDB author "Emilie Chautard, Guillaume Launay, Nicolas Thierry-Mieg, Romain Salza, Franck Peysselon, Marie Fatoux-Ardore, Sofiane Badaoui, Sylvain Vallet, Lionel Ballut, Dorian Multedo, Sylvie Ricard-Blum.".
- MatrixDB description "extracellular matrix interactions database.".
- MatrixDB laboratory "IBCP - UMR5086 CNRS / Univ Lyon1 - FRANCE".
- MatrixDB logo File:Database.png.
- MatrixDB organism "All".
- MatrixDB pmid "PMID 20852260".
- MatrixDB scope "Interactions DataBase, Biochemestry, Biacore, SPR".
- MatrixDB standard PSI-MI.
- MatrixDB title "MatrixDB".
- MatrixDB url matrixdb.ibcp.fr.
- MatrixDB wikiPageUsesTemplate Template:Infobox_biodatabase.
- MatrixDB wikiPageUsesTemplate Template:Orphan.
- MatrixDB wikiPageUsesTemplate Template:Reflist.
- MatrixDB description "extracellularmatrix interactions database.".
- MatrixDB subject Category:Biological_databases.
- MatrixDB subject Category:Polysaccharides.
- MatrixDB hypernym Database.
- MatrixDB type BiologicalDatabase.
- MatrixDB type Database.
- MatrixDB type Polysaccharide.
- MatrixDB type Work.
- MatrixDB type Carbohydrate.
- MatrixDB type Polymer.
- MatrixDB type Polysaccharide.
- MatrixDB type CreativeWork.
- MatrixDB type InformationObject.
- MatrixDB type Thing.
- MatrixDB type Q386724.
- MatrixDB comment "MatrixDB is a biological database focused on interactions established by extracellular proteins and polysaccharides. MatrixDB takes into account the multimeric nature of the extracellular proteins (for example, collagens, laminins and thrombospondins are multimers). The database was initially released in 2009 and is maintained by the research group of Sylvie Ricard-Blum at BMSSI UMR5086, Claude Bernard University Lyon 1.MatrixDB is linked with UniGene and the Human Protein Atlas.".
- MatrixDB label "MatrixDB".
- MatrixDB sameAs Q6787838.
- MatrixDB sameAs m.0g5slxd.
- MatrixDB sameAs Q6787838.
- MatrixDB wasDerivedFrom MatrixDB?oldid=699805380.
- MatrixDB depiction Database.png.
- MatrixDB homepage matrixdb.ibcp.fr.
- MatrixDB isPrimaryTopicOf MatrixDB.