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- MODELLER abstract "MODELLER is a computer program used in producing homology models of protein tertiary structures as well as quaternary structures (rarer). It implements a technique inspired by nuclear magnetic resonance known as satisfaction of spatial restraints, by which a set of geometrical criteria are used to create a probability density function for the location of each atom in the protein. The method relies on an input sequence alignment between the target amino acid sequence to be modeled and a template protein whose structure has been solved. The program also incorporates limited functionality for ab initio structure prediction of loop regions of proteins, which are often highly variable even among homologous proteins and therefore difficult to predict by homology modeling. MODELLER was originally written and is currently maintained by Andrej Sali at the University of California, San Francisco. Although it is freely available for academic use, graphical user interfaces and commercial versions are distributed by Accelrys. The ModWeb comparative protein structure modeling webserver is based on MODELLER and other tools for automatic protein structure modeling, with an option to deposit the resulting models into ModBase. A freely available GUI to MODELLER called EasyModeller is developed by Kuntal Kumar Bhusan at University Of Hyderabad,India. A new version of EasyModeller (EasyModeller 4.0) has been recently released and available for free download for Linux and Windows OS. There is also a simple interface to MODELLER in the program UCSF Chimera.".
- MODELLER wikiPageExternalLink www.uohyd.ac.in.
- MODELLER wikiPageExternalLink modeller.
- MODELLER wikiPageExternalLink modweb.
- MODELLER wikiPageExternalLink 226.
- MODELLER wikiPageExternalLink swift.htm.
- MODELLER wikiPageExternalLink modeller.html.
- MODELLER wikiPageID "8011876".
- MODELLER wikiPageLength "3364".
- MODELLER wikiPageOutDegree "24".
- MODELLER wikiPageRevisionID "690757597".
- MODELLER wikiPageWikiLink Accelrys.
- MODELLER wikiPageWikiLink Amino_acid.
- MODELLER wikiPageWikiLink Andrej_Šali.
- MODELLER wikiPageWikiLink Atom.
- MODELLER wikiPageWikiLink Biomolecular_structure.
- MODELLER wikiPageWikiLink Category:Bioinformatics_software.
- MODELLER wikiPageWikiLink Category:Computational_biology.
- MODELLER wikiPageWikiLink Category:Molecular_modelling_software.
- MODELLER wikiPageWikiLink Computer_program.
- MODELLER wikiPageWikiLink De_novo_protein_structure_prediction.
- MODELLER wikiPageWikiLink Graphical_user_interface.
- MODELLER wikiPageWikiLink Homology_(biology).
- MODELLER wikiPageWikiLink Homology_modeling.
- MODELLER wikiPageWikiLink Kuntal_Kumar_Bhusan.
- MODELLER wikiPageWikiLink List_of_protein_structure_prediction_software.
- MODELLER wikiPageWikiLink ModBase.
- MODELLER wikiPageWikiLink Nuclear_magnetic_resonance_spectroscopy_of_proteins.
- MODELLER wikiPageWikiLink Probability_density_function.
- MODELLER wikiPageWikiLink Protein.
- MODELLER wikiPageWikiLink Sequence_alignment.
- MODELLER wikiPageWikiLink Turn_(biochemistry).
- MODELLER wikiPageWikiLink UCSF_Chimera.
- MODELLER wikiPageWikiLink University_of_California,_San_Francisco.
- MODELLER wikiPageWikiLinkText "MODELLER ".
- MODELLER wikiPageWikiLinkText "MODELLER".
- MODELLER wikiPageUsesTemplate Template:Outdated.
- MODELLER wikiPageUsesTemplate Template:Reflist.
- MODELLER subject Category:Bioinformatics_software.
- MODELLER subject Category:Computational_biology.
- MODELLER subject Category:Molecular_modelling_software.
- MODELLER hypernym Program.
- MODELLER type Work.
- MODELLER comment "MODELLER is a computer program used in producing homology models of protein tertiary structures as well as quaternary structures (rarer). It implements a technique inspired by nuclear magnetic resonance known as satisfaction of spatial restraints, by which a set of geometrical criteria are used to create a probability density function for the location of each atom in the protein.".
- MODELLER label "MODELLER".
- MODELLER sameAs Q3859815.
- MODELLER sameAs Modeller.
- MODELLER sameAs MODELLER.
- MODELLER sameAs m.026nhhc.
- MODELLER sameAs Q3859815.
- MODELLER wasDerivedFrom MODELLER?oldid=690757597.
- MODELLER isPrimaryTopicOf MODELLER.