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- LocDB abstract "LocDB is an expert-curated database that collects experimental annotations for the subcellular localization of proteins in Homo sapiens (human) and Arabidopsis thaliana (Weed). The database also contains predictions of subcellular localization from a variety of state-of-the-art prediction methods for all proteins with experimental information.Proteins are the fundamental functional components of cells. They are responsible for transforming genetic information into physical reality. These macromolecules mediate gene regulation, enzymatic catalysis, cellular metabolism, DNA replication, and transport of nutrients, recognition, and transmission of signals. The interpretation of this wealth of data to elucidate protein function in post-genomic era is the a fundamental challenge. To date, even for the most well-studied organisms such as yeast, about one-fourth of the proteins remain uncharacterized. A major obstacle in experimentally determining protein function is that the studies require enormous resources. Hence, the gap between the amount of sequences deposited in databases and the experimental characterization of the corresponding proteins is ever-growing. Bioinformatics plays a central role in bridging this sequence-function gap through the development of tools for faster and more effective prediction of protein function. This repository effectively fills the gap between experimental annotations and predictions and provides a bigger and more reliable dataset for the testing of new prediction methods.".
- LocDB thumbnail Database.png?width=300.
- LocDB title "LocDB".
- LocDB wikiPageExternalLink locDB.
- LocDB wikiPageExternalLink search.php.
- LocDB wikiPageID "31312165".
- LocDB wikiPageLength "3008".
- LocDB wikiPageOutDegree "11".
- LocDB wikiPageRevisionID "637933276".
- LocDB wikiPageWikiLink Arabidopsis_thaliana.
- LocDB wikiPageWikiLink Category:Biological_databases.
- LocDB wikiPageWikiLink Category:Protein_targeting.
- LocDB wikiPageWikiLink Category:Proteins.
- LocDB wikiPageWikiLink Columbia_University.
- LocDB wikiPageWikiLink Homo_sapiens.
- LocDB wikiPageWikiLink Protein_subcellular_localization_prediction.
- LocDB wikiPageWikiLink Protein_targeting.
- LocDB wikiPageWikiLink File:Database.png.
- LocDB wikiPageWikiLinkText "LocDB".
- LocDB author "Shruti Rastogi".
- LocDB center Columbia_University.
- LocDB description "experimental annotations of localization".
- LocDB format "MySQL database".
- LocDB laboratory "Department of Biochemistry and Molecular Biophysics".
- LocDB logo File:Database.png.
- LocDB organism Arabidopsis_thaliana.
- LocDB organism Homo_sapiens.
- LocDB pmid "Rastogi & al.".
- LocDB released "2010".
- LocDB title "LocDB".
- LocDB url locDB.
- LocDB version "Release 1.0".
- LocDB webservice search.php.
- LocDB wikiPageUsesTemplate Template:Biodatabase-stub.
- LocDB wikiPageUsesTemplate Template:Infobox_biodatabase.
- LocDB wikiPageUsesTemplate Template:Reflist.
- LocDB description "experimental annotations of localization".
- LocDB subject Category:Biological_databases.
- LocDB subject Category:Protein_targeting.
- LocDB subject Category:Proteins.
- LocDB hypernym Database.
- LocDB type BiologicalDatabase.
- LocDB type Biomolecule.
- LocDB type Database.
- LocDB type Work.
- LocDB type Biomolecule.
- LocDB type Nutrient.
- LocDB type CreativeWork.
- LocDB type InformationObject.
- LocDB type Thing.
- LocDB type Q386724.
- LocDB comment "LocDB is an expert-curated database that collects experimental annotations for the subcellular localization of proteins in Homo sapiens (human) and Arabidopsis thaliana (Weed). The database also contains predictions of subcellular localization from a variety of state-of-the-art prediction methods for all proteins with experimental information.Proteins are the fundamental functional components of cells. They are responsible for transforming genetic information into physical reality.".
- LocDB label "LocDB".
- LocDB sameAs Q6663909.
- LocDB sameAs m.0gjcdvb.
- LocDB sameAs Q6663909.
- LocDB wasDerivedFrom LocDB?oldid=637933276.
- LocDB depiction Database.png.
- LocDB homepage locDB.
- LocDB isPrimaryTopicOf LocDB.