Matches in DBpedia 2016-04 for { <http://dbpedia.org/resource/Inferring_horizontal_gene_transfer> ?p ?o }
- Inferring_horizontal_gene_transfer abstract "Horizontal or lateral gene transfer (HGT or LGT) is the transmission of portions of genomic DNA between organisms through a process decoupled from vertical inheritance. In the presence of HGT events, different fragments of the genome are the result of different evolutionary histories. This can therefore complicate the investigations of evolutionary relatedness of lineages and species. Also, as HGT can bring into genomes radically different genotypes from distant lineages, or even new genes bearing new functions, it is a major source of phenotypic innovation and a mechanism of niche adaptation. For example, of particular relevance to human health is the lateral transfer of antibiotic resistance and pathogenicity determinants, leading to the emergence of pathogenic lineages.Inferring horizontal gene transfer through computational identification of HGT events relies upon the investigation of sequence composition or evolutionary history of genes. Sequence composition-based (\"parametric\") methods search for deviations from the genomic average whereas evolutionary history-based (\"phylogenetic\") approaches identify genes whose evolutionary history significantly differs from that of the host species. The evaluation and benchmarking of HGT inference methods typically rely upon simulated genomes, for which the true history is known. On real data, different methods tend to infer different HGT events, and as a result it can be difficult to ascertain all but simple and clear-cut HGT events.".
- Inferring_horizontal_gene_transfer thumbnail Inferring_horizontal_gene_transfer_conceptual_overview.svg?width=300.
- Inferring_horizontal_gene_transfer wikiPageID "46968364".
- Inferring_horizontal_gene_transfer wikiPageLength "84536".
- Inferring_horizontal_gene_transfer wikiPageOutDegree "134".
- Inferring_horizontal_gene_transfer wikiPageRevisionID "704573858".
- Inferring_horizontal_gene_transfer wikiPageWikiLink Algorithmic_efficiency.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Alphaproteobacteria.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Amino_acid.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Anaeromyxobacter_dehalogenans.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Antimicrobial_resistance.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Archaea.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Autocorrelation.
- Inferring_horizontal_gene_transfer wikiPageWikiLink BLAST.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Bacteria.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Bacterial_conjugation.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Base_pair.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Bdellovibrio.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Bioinformatics.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Bipartite_graph.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Bootstrapping_(statistics).
- Inferring_horizontal_gene_transfer wikiPageWikiLink Candidate_gene.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Category:Computational_biology.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Chimera_(genetics).
- Inferring_horizontal_gene_transfer wikiPageWikiLink Clade.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Coalescent_theory.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Codon_usage_bias.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Coevolution.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Common_descent.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Comparative_biology.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Comparative_genomics.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Computational_phylogenetics.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Computer_simulation.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Coplanarity.
- Inferring_horizontal_gene_transfer wikiPageWikiLink DNA.
- Inferring_horizontal_gene_transfer wikiPageWikiLink DNA_codon_table.
- Inferring_horizontal_gene_transfer wikiPageWikiLink DNA_replication.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Deltaproteobacteria.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Dynamic_programming.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Escherichia_coli.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Evolution.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Exponentiation.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Extinction.
- Inferring_horizontal_gene_transfer wikiPageWikiLink File:Inferring_horizontal_gene_transfer_average_GC_content.svg.
- Inferring_horizontal_gene_transfer wikiPageWikiLink File:Inferring_horizontal_gene_transfer_conceptual_overview.svg.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Frankia.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Frederick_Griffith.
- Inferring_horizontal_gene_transfer wikiPageWikiLink GC-content.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Gammaproteobacteria.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Gene.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Gene_conversion.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Gene_duplication.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Gene_expression.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Gene_family.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Gene_polymorphism.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Gene_pool.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Genome.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Genomic_island.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Genomic_signature.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Genotype.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Graph_(discrete_mathematics).
- Inferring_horizontal_gene_transfer wikiPageWikiLink Griffiths_experiment.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Homologous_recombination.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Homology_(biology).
- Inferring_horizontal_gene_transfer wikiPageWikiLink Horizontal_gene_transfer.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Horizontal_gene_transfer_in_evolution.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Human_evolutionary_genetics.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Index_of_evolutionary_biology_articles.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Integrase.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Interaction_energy.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Intersection_(set_theory).
- Inferring_horizontal_gene_transfer wikiPageWikiLink K-mer.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Kingdom_(biology).
- Inferring_horizontal_gene_transfer wikiPageWikiLink Likelihood-ratio_test.
- Inferring_horizontal_gene_transfer wikiPageWikiLink List_of_sequenced_eukaryotic_genomes.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Locus_(genetics).
- Inferring_horizontal_gene_transfer wikiPageWikiLink Machine_learning.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Markov_chain.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Maximum_parsimony_(phylogenetics).
- Inferring_horizontal_gene_transfer wikiPageWikiLink Molecular_clock.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Moores_law.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Mutation.
- Inferring_horizontal_gene_transfer wikiPageWikiLink NP-hardness.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Niche_adaptation.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Nucleotide.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Occams_razor.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Oligonucleotide.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Open_reading_frame.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Operon.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Pathogen.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Peptide_sequence.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Phenotype.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Phylogenetic_network.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Phylogenetic_profiling.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Phylogenetic_tree.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Phylogenetics.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Posterior_probability.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Prediction.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Probability_theory.
- Inferring_horizontal_gene_transfer wikiPageWikiLink Prophage.