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- HopC_RNA_motif abstract "The hopC RNA motif is a predicted cis-regulatory element identified by a bioinformatic screen for conserved RNA secondary structures. hopC RNAs are exclusively found within bacteria classified within the genus Helicobacter, some of which are human pathogens that infect the stomach and can cause ulcers.hopC RNAs are found upstream of an operon of two genes called hopC and hopB (also called alpa and alpB). Experiments on the start of transcription for the hopCB operon indicate that hopC RNAs lie within the 5' untranslated region of this operon. The hopCB operon is induced to higher levels of expression in response to low pH. This fits in with data that HopCB is involved in binding to human epithelial cells, which is presumably something that the bacteria do during infection of the low-pH environment of the stomach.Previous work suggested that a repeat of 13 thymidine nucleotides might be involved in regulating the abundance of the hopCB operon. However, this 13-nucleotide region lies upstream of the transcription start site, and is therefore independent of hopC motif RNAs.".
- HopC_RNA_motif thumbnail HopC-RNA.svg?width=300.
- HopC_RNA_motif wikiPageID "26619137".
- HopC_RNA_motif wikiPageLength "2972".
- HopC_RNA_motif wikiPageOutDegree "22".
- HopC_RNA_motif wikiPageRevisionID "678918345".
- HopC_RNA_motif wikiPageWikiLink Bacteria.
- HopC_RNA_motif wikiPageWikiLink Bioinformatics.
- HopC_RNA_motif wikiPageWikiLink Biomolecular_structure.
- HopC_RNA_motif wikiPageWikiLink Category:Cis-regulatory_RNA_elements.
- HopC_RNA_motif wikiPageWikiLink Cis-Regulatory_element.
- HopC_RNA_motif wikiPageWikiLink Epithelium.
- HopC_RNA_motif wikiPageWikiLink Five_prime_untranslated_region.
- HopC_RNA_motif wikiPageWikiLink Genus.
- HopC_RNA_motif wikiPageWikiLink Helicobacter.
- HopC_RNA_motif wikiPageWikiLink Human.
- HopC_RNA_motif wikiPageWikiLink Nucleotide.
- HopC_RNA_motif wikiPageWikiLink Operon.
- HopC_RNA_motif wikiPageWikiLink PH.
- HopC_RNA_motif wikiPageWikiLink Pathogen.
- HopC_RNA_motif wikiPageWikiLink Peptic_ulcer.
- HopC_RNA_motif wikiPageWikiLink RNA.
- HopC_RNA_motif wikiPageWikiLink Stomach.
- HopC_RNA_motif wikiPageWikiLink Thymidine.
- HopC_RNA_motif wikiPageWikiLink Transcription_(genetics).
- HopC_RNA_motif wikiPageWikiLinkText "HopC RNA motif".
- HopC_RNA_motif caption "Consensus secondary structure of hopC RNAs".
- HopC_RNA_motif id "RF01741".
- HopC_RNA_motif name "hopC RNA".
- HopC_RNA_motif rfam "RF01741".
- HopC_RNA_motif rnaType "Cis-regulatory element".
- HopC_RNA_motif symbol "hopC RNA".
- HopC_RNA_motif taxDomain "Helicobacter".
- HopC_RNA_motif width "290".
- HopC_RNA_motif wikiPageUsesTemplate Template:Infobox_rfam.
- HopC_RNA_motif wikiPageUsesTemplate Template:Molecular-cell-biology-stub.
- HopC_RNA_motif wikiPageUsesTemplate Template:Orphan.
- HopC_RNA_motif wikiPageUsesTemplate Template:Reflist.
- HopC_RNA_motif wikiPageUsesTemplate Template:Rfam.
- HopC_RNA_motif subject Category:Cis-regulatory_RNA_elements.
- HopC_RNA_motif hypernym Element.
- HopC_RNA_motif type MilitaryUnit.
- HopC_RNA_motif type Element.
- HopC_RNA_motif comment "The hopC RNA motif is a predicted cis-regulatory element identified by a bioinformatic screen for conserved RNA secondary structures. hopC RNAs are exclusively found within bacteria classified within the genus Helicobacter, some of which are human pathogens that infect the stomach and can cause ulcers.hopC RNAs are found upstream of an operon of two genes called hopC and hopB (also called alpa and alpB).".
- HopC_RNA_motif label "HopC RNA motif".
- HopC_RNA_motif sameAs Q17140324.
- HopC_RNA_motif sameAs m.0bh71kh.
- HopC_RNA_motif sameAs Q17140324.
- HopC_RNA_motif wasDerivedFrom HopC_RNA_motif?oldid=678918345.
- HopC_RNA_motif depiction HopC-RNA.svg.
- HopC_RNA_motif isPrimaryTopicOf HopC_RNA_motif.
