Matches in DBpedia 2016-04 for { <http://dbpedia.org/resource/BioJava> ?p ?o }
- BioJava abstract "BioJava is an open source project dedicated to providing Java tools for processing biological data. BioJava is a set of library functions written in the Java programming language for manipulating sequences, protein structures, file parsers, CORBA interoperability, DAS, access to AceDB, dynamic programming, and simple statistical routines. BioJava supports a huge range of data, starting from DNA and protein sequences to the level of 3D protein structures. The BioJava libraries are useful for automating many daily and mundane bioinformatics tasks such as to parsing a PDB file, interacting with Jmol and many more. This Application programming interface (API) provides various file parsers, data models and algorithms to facilitate working with the standard data formats and enables rapid application development and analysis. These libraries have also been used in development of various extended analysis tools [1], for example: MUSI: an integrated system for identifying multiple specificity from very large peptide or nucleic acid data sets. JEnsembl: a version-aware Java API to Ensembl data systems. Expression profiling of signature gene sets with trinucleotide threading Resolving the structural features of genomic islands: a machine learning approach Utility library for structural bioinformaticsThe BioJava project grew out of work by Thomas Down and Matthew Pocock to create an API to simplify development of Java-based Bioinformatics tools. BioJava is an active open source project that has been developed over more than 12 years and by more than 60 developers. BioJava is one of a number of Bio* projects designed to reduce code duplication. Examples of such projects that fall under Bio* apart from BioJava are BioPython, BioPerl, BioRuby, EMBOSS etc.The latest version of BioJava (3.0.5) is a major update to the previous versions. The new version of BioJava contains several independent modules. The old project has been moved to a separate project called biojava-legacy project.".
- BioJava frequentlyUpdated "yes".
- BioJava genre Bioinformatics.
- BioJava language Java_(programming_language).
- BioJava latestPreviewVersion "Nightly builds".
- BioJava latestReleaseVersion "3.0.5".
- BioJava license GNU_Lesser_General_Public_License.
- BioJava programmingLanguage Java_(programming_language).
- BioJava status "Active".
- BioJava wikiPageExternalLink 3369.full.
- BioJava wikiPageExternalLink biojava.org.
- BioJava wikiPageExternalLink BioJava:CookBook3:FASTQ.
- BioJava wikiPageExternalLink Main_Page.
- BioJava wikiPageExternalLink hmmer.janelia.org.
- BioJava wikiPageExternalLink lajolla.sourceforge.net.
- BioJava wikiPageExternalLink scholar?cites=3048631375755320177&as_sdt=2005&sciodt=0,5&hl=en.
- BioJava wikiPageExternalLink prompt.
- BioJava wikiPageExternalLink www.bioclipse.net.
- BioJava wikiPageExternalLink LSTM_protein.
- BioJava wikiPageExternalLink SIMILARITIES.
- BioJava wikiPageExternalLink api1.8.2.
- BioJava wikiPageExternalLink www.biomatters.com.
- BioJava wikiPageExternalLink www.bioweka.org.
- BioJava wikiPageExternalLink strap.
- BioJava wikiPageExternalLink StrapProtein2BiojavaSequence.
- BioJava wikiPageExternalLink www.cytoscape.org.
- BioJava wikiPageExternalLink www.dengueinfo.org.
- BioJava wikiPageExternalLink dazzle.
- BioJava wikiPageExternalLink index.html.
- BioJava wikiPageExternalLink www.genostar.com.
- BioJava wikiPageExternalLink www.idbs.com.
- BioJava wikiPageExternalLink BioSense.
- BioJava wikiPageExternalLink www.jmol.org.
- BioJava wikiPageExternalLink www.jstacs.de.
- BioJava wikiPageExternalLink MassSieve.
- BioJava wikiPageExternalLink RONN.
- BioJava wikiPageID "559858".
- BioJava wikiPageLength "44592".
- BioJava wikiPageOutDegree "64".
- BioJava wikiPageRevisionID "680745003".
- BioJava wikiPageWikiLink AceDB.
- BioJava wikiPageWikiLink Amino_acid.
- BioJava wikiPageWikiLink Apache_Maven.
- BioJava wikiPageWikiLink Application_programming_interface.
- BioJava wikiPageWikiLink BioPerl.
- BioJava wikiPageWikiLink BioRuby.
- BioJava wikiPageWikiLink Bioclipse.
- BioJava wikiPageWikiLink Bioinformatics.
- BioJava wikiPageWikiLink Biological_database.
- BioJava wikiPageWikiLink Biology.
- BioJava wikiPageWikiLink Biopython.
- BioJava wikiPageWikiLink Category:Bioinformatics.
- BioJava wikiPageWikiLink Category:Bioinformatics_software.
- BioJava wikiPageWikiLink Category:Java_platform_software.
- BioJava wikiPageWikiLink Central_processing_unit.
- BioJava wikiPageWikiLink Class_(computer_programming).
- BioJava wikiPageWikiLink Common_Object_Request_Broker_Architecture.
- BioJava wikiPageWikiLink Distributed_Annotation_System.
- BioJava wikiPageWikiLink Disulfide.
- BioJava wikiPageWikiLink File:This_window_shows_two_proteins_with_IDs_%224hhb.A%22_and_%224hhb.B%22_aligned_against_each_other.png.
- BioJava wikiPageWikiLink GNU_Lesser_General_Public_License.
- BioJava wikiPageWikiLink GitHub.
- BioJava wikiPageWikiLink Glycosylation.
- BioJava wikiPageWikiLink Instability_index.
- BioJava wikiPageWikiLink Interface_(computing).
- BioJava wikiPageWikiLink Isoelectric_point.
- BioJava wikiPageWikiLink Java_(programming_language).
- BioJava wikiPageWikiLink Java_(software_platform).
- BioJava wikiPageWikiLink List_of_file_formats.
- BioJava wikiPageWikiLink List_of_software_for_molecular_mechanics_modeling.
- BioJava wikiPageWikiLink Mass_attenuation_coefficient.
- BioJava wikiPageWikiLink Mass_spectrometry.
- BioJava wikiPageWikiLink Molecular_mass.
- BioJava wikiPageWikiLink Multiple_sequence_alignment.
- BioJava wikiPageWikiLink Needleman–Wunsch_algorithm.
- BioJava wikiPageWikiLink Nucleic_acid_sequence.
- BioJava wikiPageWikiLink Nucleotide.
- BioJava wikiPageWikiLink Open-source_software.
- BioJava wikiPageWikiLink Open_Bioinformatics_Foundation.
- BioJava wikiPageWikiLink Open_source.
- BioJava wikiPageWikiLink Peptide_sequence.
- BioJava wikiPageWikiLink Perl.
- BioJava wikiPageWikiLink Phosphorylation.
- BioJava wikiPageWikiLink Protein_Data_Bank.
- BioJava wikiPageWikiLink Proxy_pattern.
- BioJava wikiPageWikiLink Representational_state_transfer.
- BioJava wikiPageWikiLink Sequence_alignment.
- BioJava wikiPageWikiLink Smith–Waterman_algorithm.
- BioJava wikiPageWikiLink UniProt.
- BioJava wikiPageWikiLink XML.
- BioJava wikiPageWikiLink File:An_example_application_using_the_ModFinder_module_and_the_protein_structure_module.png.
- BioJava wikiPageWikiLinkText "BioJava".
- BioJava author "Andreas Prlić".
- BioJava frequentlyUpdated "yes".
- BioJava genre Bioinformatics.
- BioJava language Java_(programming_language).
- BioJava latestPreviewVersion "Nightly builds".
- BioJava latestReleaseVersion "3".
- BioJava license GNU_Lesser_General_Public_License.
- BioJava name "BioJava".