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- SAM-Chlorobi_RNA_motif abstract "The SAM-Chlorobi RNA motif is a conserved RNA structure that was identified by bioinformatics. The RNAs are found only in bacteria classified as within the phylum Chlorobi. These RNAs are always in the 5' untranslated regions of operons that contain metK and ahcY genes. metK genes encode methionine adenosyltransferase, which synthesizes S-adenosyl methionine (SAM), and ahcY genes encode S-adenosylhomocysteine hydrolase, which degrade the related metabolite S-Adenosyl-L-homocysteine (SAH). In fact all predicted metK and ahcY genes within Chlorobi bacteria as of 2010 are preceded by predicted SAM-Chlorobi RNAs. Predicted promoter sequences are consistently found upstream of SAM-Chlorobi RNAs, and these promoter sequences imply that SAM-Chlorobi RNAs are indeed transcribed as RNAs. The promoter sequences are commonly associated with strong transcription in the phyla Chlorobi and Bacteroidetes, but are not used by most lineages of bacteria. The placement of SAM-Chlorobi RNAs suggests that they are involved in the regulation of the metK/ahcY operon through an unknown mechanism.".
- SAM-Chlorobi_RNA_motif thumbnail SAM-Chlorobi-RNA.svg?width=300.
- SAM-Chlorobi_RNA_motif wikiPageID "26838658".
- SAM-Chlorobi_RNA_motif wikiPageLength "2263".
- SAM-Chlorobi_RNA_motif wikiPageOutDegree "16".
- SAM-Chlorobi_RNA_motif wikiPageRevisionID "679037782".
- SAM-Chlorobi_RNA_motif wikiPageWikiLink 5_untranslated_region.
- SAM-Chlorobi_RNA_motif wikiPageWikiLink Adenosylhomocysteinase.
- SAM-Chlorobi_RNA_motif wikiPageWikiLink Bacteria.
- SAM-Chlorobi_RNA_motif wikiPageWikiLink Bacteroidetes.
- SAM-Chlorobi_RNA_motif wikiPageWikiLink Bioinformatics.
- SAM-Chlorobi_RNA_motif wikiPageWikiLink Category:Cis-regulatory_RNA_elements.
- SAM-Chlorobi_RNA_motif wikiPageWikiLink Chlorobi.
- SAM-Chlorobi_RNA_motif wikiPageWikiLink Five_prime_untranslated_region.
- SAM-Chlorobi_RNA_motif wikiPageWikiLink Green_sulfur_bacteria.
- SAM-Chlorobi_RNA_motif wikiPageWikiLink Methionine_adenosyltransferase.
- SAM-Chlorobi_RNA_motif wikiPageWikiLink Operon.
- SAM-Chlorobi_RNA_motif wikiPageWikiLink Phylum.
- SAM-Chlorobi_RNA_motif wikiPageWikiLink Promoter_(biology).
- SAM-Chlorobi_RNA_motif wikiPageWikiLink Promoter_(genetics).
- SAM-Chlorobi_RNA_motif wikiPageWikiLink RNA.
- SAM-Chlorobi_RNA_motif wikiPageWikiLink S-Adenosyl-L-homocysteine.
- SAM-Chlorobi_RNA_motif wikiPageWikiLink S-Adenosyl_methionine.
- SAM-Chlorobi_RNA_motif wikiPageWikiLink S-adenosyl_methionine.
- SAM-Chlorobi_RNA_motif wikiPageWikiLink S-adenosylmethionine_synthetase_enzyme.
- SAM-Chlorobi_RNA_motif wikiPageWikiLink Transcription_(biology).
- SAM-Chlorobi_RNA_motif wikiPageWikiLink Transcription_(genetics).
- SAM-Chlorobi_RNA_motif wikiPageWikiLinkText "SAM-Chlorobi RNA motif".
- SAM-Chlorobi_RNA_motif caption "Consensus secondary structure of SAM-Chlorobi RNAs".
- SAM-Chlorobi_RNA_motif hasPhotoCollection SAM-Chlorobi_RNA_motif.
- SAM-Chlorobi_RNA_motif id "RF01724".
- SAM-Chlorobi_RNA_motif name "SAM-Chlorobi RNA".
- SAM-Chlorobi_RNA_motif rfam "RF01724".
- SAM-Chlorobi_RNA_motif rnaType "Cis-regulatory element".
- SAM-Chlorobi_RNA_motif symbol "SAM-Chlorobi RNA".
- SAM-Chlorobi_RNA_motif taxDomain Chlorobi.
- SAM-Chlorobi_RNA_motif taxDomain Green_sulfur_bacteria.
- SAM-Chlorobi_RNA_motif width "450".
- SAM-Chlorobi_RNA_motif wikiPageUsesTemplate Template:Infobox_rfam.
- SAM-Chlorobi_RNA_motif wikiPageUsesTemplate Template:Molecular-cell-biology-stub.
- SAM-Chlorobi_RNA_motif wikiPageUsesTemplate Template:Rfam.
- SAM-Chlorobi_RNA_motif subject Category:Cis-regulatory_RNA_elements.
- SAM-Chlorobi_RNA_motif hypernym Structure.
- SAM-Chlorobi_RNA_motif type Building.
- SAM-Chlorobi_RNA_motif type Element.
- SAM-Chlorobi_RNA_motif comment "The SAM-Chlorobi RNA motif is a conserved RNA structure that was identified by bioinformatics. The RNAs are found only in bacteria classified as within the phylum Chlorobi. These RNAs are always in the 5' untranslated regions of operons that contain metK and ahcY genes. metK genes encode methionine adenosyltransferase, which synthesizes S-adenosyl methionine (SAM), and ahcY genes encode S-adenosylhomocysteine hydrolase, which degrade the related metabolite S-Adenosyl-L-homocysteine (SAH).".
- SAM-Chlorobi_RNA_motif label "SAM-Chlorobi RNA motif".
- SAM-Chlorobi_RNA_motif sameAs m.0bmg81l.
- SAM-Chlorobi_RNA_motif sameAs Q7388614.
- SAM-Chlorobi_RNA_motif sameAs Q7388614.
- SAM-Chlorobi_RNA_motif wasDerivedFrom SAM-Chlorobi_RNA_motif?oldid=679037782.
- SAM-Chlorobi_RNA_motif depiction SAM-Chlorobi-RNA.svg.
- SAM-Chlorobi_RNA_motif isPrimaryTopicOf SAM-Chlorobi_RNA_motif.