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- PICRUSt abstract "PICRUStis a bioinformatics software, the name is an abbreviation for phylogenetic investigation of communities by reconstructionof unobserved states.The tool serves in the field of metagenomic analysis where it allows inference of the functional profile of a microbialcommunity based on marker gene survey along one or more samples.In essence, PICRUSt takes a user supplied OTU table, representing the marker gene sequences (most commonly a 16S cluster) accompanied with its relative abundance in each of the samples. The output of PICRUSt is a sample by functional-gene-count marix, telling the count of each funtional-gene in each of the samples surveyed.The ability of PICRUSt to estimate the functional-gene profile for a given sample relies on a set of known sequenced genomes.For each of the marker genes in the actual samples, PICRUSt tries to retrieve the phylogenetically closest known sequenced genome(s), and from that derive the approximated functional gene content of the unknown genome represented by the given markergene.".
- PICRUSt wikiPageExternalLink picrust.github.com.
- PICRUSt wikiPageID "47268817".
- PICRUSt wikiPageLength "3142".
- PICRUSt wikiPageOutDegree "13".
- PICRUSt wikiPageRevisionID "672422468".
- PICRUSt wikiPageWikiLink 16S_ribosomal_RNA.
- PICRUSt wikiPageWikiLink Bioinformatics.
- PICRUSt wikiPageWikiLink Category:Bioinformatics.
- PICRUSt wikiPageWikiLink Category:Environmental_microbiology.
- PICRUSt wikiPageWikiLink Category:Metagenomics.
- PICRUSt wikiPageWikiLink Cluster_analysis.
- PICRUSt wikiPageWikiLink Functional_profile.
- PICRUSt wikiPageWikiLink Genome.
- PICRUSt wikiPageWikiLink Genomes.
- PICRUSt wikiPageWikiLink Marker_gene.
- PICRUSt wikiPageWikiLink Metagenomic.
- PICRUSt wikiPageWikiLink Metagenomics.
- PICRUSt wikiPageWikiLink Microbial.
- PICRUSt wikiPageWikiLink Microorganism.
- PICRUSt wikiPageWikiLink Operational_taxonomic_unit.
- PICRUSt wikiPageWikiLink Sequenced.
- PICRUSt wikiPageWikiLink Sequencing.
- PICRUSt author "Morgan Langille ".
- PICRUSt developer "Morgan Langille ".
- PICRUSt hasPhotoCollection PICRUSt.
- PICRUSt name "PICRUSt".
- PICRUSt website picrust.github.com.
- PICRUSt wikiPageUsesTemplate Template:Infobox_software.
- PICRUSt wikiPageUsesTemplate Template:Reflist.
- PICRUSt subject Category:Bioinformatics.
- PICRUSt subject Category:Environmental_microbiology.
- PICRUSt subject Category:Metagenomics.
- PICRUSt hypernym Abbreviation.
- PICRUSt type Organisation.
- PICRUSt type Software.
- PICRUSt type Work.
- PICRUSt type CreativeWork.
- PICRUSt type Thing.
- PICRUSt type Q386724.
- PICRUSt type Q7397.
- PICRUSt comment "PICRUStis a bioinformatics software, the name is an abbreviation for phylogenetic investigation of communities by reconstructionof unobserved states.The tool serves in the field of metagenomic analysis where it allows inference of the functional profile of a microbialcommunity based on marker gene survey along one or more samples.In essence, PICRUSt takes a user supplied OTU table, representing the marker gene sequences (most commonly a 16S cluster) accompanied with its relative abundance in each of the samples. ".
- PICRUSt label "PICRUSt".
- PICRUSt wasDerivedFrom PICRUSt?oldid=672422468.
- PICRUSt homepage picrust.github.com.
- PICRUSt isPrimaryTopicOf PICRUSt.
- PICRUSt name "PICRUSt".