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- BLAT_(bioinformatics) abstract "BLAT (BLAST-like alignment tool) is a pairwise sequence alignment algorithm that was developed by Jim Kent at the University of California Santa Cruz (UCSC) in the early 2000s to assist in the assembly and annotation of the human genome. It was designed primarily to decrease the time needed to align millions of mouse genomic reads and expressed sequence tags against the human genome sequence. The alignment tools of the time were not capable of performing these operations in a manner that would allow a regular update of the human genome assembly. Compared to pre-existing tools, BLAT was ~500 times faster with performing mRNA/DNA alignments and ~50 times faster with protein/protein alignments.".
- BLAT_(bioinformatics) developer Jim_Kent.
- BLAT_(bioinformatics) developer University_of_California,_Santa_Cruz.
- BLAT_(bioinformatics) license blat3.
- BLAT_(bioinformatics) license src.
- BLAT_(bioinformatics) wikiPageExternalLink genome.ucsc.edu.
- BLAT_(bioinformatics) wikiPageExternalLink FAQblat.
- BLAT_(bioinformatics) wikiPageExternalLink blat3.
- BLAT_(bioinformatics) wikiPageExternalLink hgBlat.
- BLAT_(bioinformatics) wikiPageExternalLink hgBlat?org=Human.
- BLAT_(bioinformatics) wikiPageExternalLink blatSpec.html.
- BLAT_(bioinformatics) wikiPageExternalLink src.
- BLAT_(bioinformatics) wikiPageExternalLink www.kentinformatics.com.
- BLAT_(bioinformatics) wikiPageExternalLink products.html.
- BLAT_(bioinformatics) wikiPageExternalLink src.
- BLAT_(bioinformatics) wikiPageID "10512032".
- BLAT_(bioinformatics) wikiPageLength "17133".
- BLAT_(bioinformatics) wikiPageOutDegree "35".
- BLAT_(bioinformatics) wikiPageRevisionID "679149785".
- BLAT_(bioinformatics) wikiPageWikiLink Accession_number_(bioinformatics).
- BLAT_(bioinformatics) wikiPageWikiLink Algorithm.
- BLAT_(bioinformatics) wikiPageWikiLink Amino_acid.
- BLAT_(bioinformatics) wikiPageWikiLink Amino_acids.
- BLAT_(bioinformatics) wikiPageWikiLink BLAST.
- BLAT_(bioinformatics) wikiPageWikiLink Category:Bioinformatics_software.
- BLAT_(bioinformatics) wikiPageWikiLink Category:Laboratory_software.
- BLAT_(bioinformatics) wikiPageWikiLink DNA.
- BLAT_(bioinformatics) wikiPageWikiLink Dynamic_programming.
- BLAT_(bioinformatics) wikiPageWikiLink Exon.
- BLAT_(bioinformatics) wikiPageWikiLink Exons.
- BLAT_(bioinformatics) wikiPageWikiLink Expressed_sequence_tag.
- BLAT_(bioinformatics) wikiPageWikiLink Expressed_sequence_tags.
- BLAT_(bioinformatics) wikiPageWikiLink FASTA_format.
- BLAT_(bioinformatics) wikiPageWikiLink File:BLAT_Search_Genome.png.
- BLAT_(bioinformatics) wikiPageWikiLink Hash_table.
- BLAT_(bioinformatics) wikiPageWikiLink Heuristic_(computer_science).
- BLAT_(bioinformatics) wikiPageWikiLink Homology_(biology).
- BLAT_(bioinformatics) wikiPageWikiLink Human_Genome.
- BLAT_(bioinformatics) wikiPageWikiLink Human_genome.
- BLAT_(bioinformatics) wikiPageWikiLink Intron.
- BLAT_(bioinformatics) wikiPageWikiLink Jim_Kent.
- BLAT_(bioinformatics) wikiPageWikiLink List_of_sequence_alignment_software.
- BLAT_(bioinformatics) wikiPageWikiLink MRNA.
- BLAT_(bioinformatics) wikiPageWikiLink Messenger_RNA.
- BLAT_(bioinformatics) wikiPageWikiLink Nucleotide.
- BLAT_(bioinformatics) wikiPageWikiLink Nucleotides.
- BLAT_(bioinformatics) wikiPageWikiLink Protein.
- BLAT_(bioinformatics) wikiPageWikiLink RNA_splicing.
- BLAT_(bioinformatics) wikiPageWikiLink Sequence_alignment.
- BLAT_(bioinformatics) wikiPageWikiLink Sequence_alignment_software.
- BLAT_(bioinformatics) wikiPageWikiLink University_of_California,_Santa_Cruz.
- BLAT_(bioinformatics) wikiPageWikiLink University_of_California_Santa_Cruz.
- BLAT_(bioinformatics) wikiPageWikiLink File:BLAT_indexing.png.
- BLAT_(bioinformatics) wikiPageWikiLinkText "BLAT (bioinformatics)".
- BLAT_(bioinformatics) wikiPageWikiLinkText "BLAT Search Alignment".
- BLAT_(bioinformatics) wikiPageWikiLinkText "BLAT".
- BLAT_(bioinformatics) developer Jim_Kent.
- BLAT_(bioinformatics) developer University_of_California,_Santa_Cruz.
- BLAT_(bioinformatics) developer University_of_California_Santa_Cruz.
- BLAT_(bioinformatics) genre "Bioinformatics tool".
- BLAT_(bioinformatics) hasPhotoCollection BLAT_(bioinformatics).
- BLAT_(bioinformatics) license blat3.
- BLAT_(bioinformatics) license src.
- BLAT_(bioinformatics) name "BLAT".
- BLAT_(bioinformatics) wikiPageUsesTemplate Template:Infobox_software.
- BLAT_(bioinformatics) wikiPageUsesTemplate Template:Reflist.
- BLAT_(bioinformatics) subject Category:Bioinformatics_software.
- BLAT_(bioinformatics) subject Category:Laboratory_software.
- BLAT_(bioinformatics) hypernym Algorithm.
- BLAT_(bioinformatics) type Software.
- BLAT_(bioinformatics) type Work.
- BLAT_(bioinformatics) type CreativeWork.
- BLAT_(bioinformatics) type Thing.
- BLAT_(bioinformatics) type Q386724.
- BLAT_(bioinformatics) type Q7397.
- BLAT_(bioinformatics) comment "BLAT (BLAST-like alignment tool) is a pairwise sequence alignment algorithm that was developed by Jim Kent at the University of California Santa Cruz (UCSC) in the early 2000s to assist in the assembly and annotation of the human genome. It was designed primarily to decrease the time needed to align millions of mouse genomic reads and expressed sequence tags against the human genome sequence.".
- BLAT_(bioinformatics) label "BLAT (bioinformatics)".
- BLAT_(bioinformatics) sameAs m.02qgb45.
- BLAT_(bioinformatics) sameAs Q4835846.
- BLAT_(bioinformatics) sameAs Q4835846.
- BLAT_(bioinformatics) wasDerivedFrom BLAT_(bioinformatics)?oldid=679149785.
- BLAT_(bioinformatics) homepage genome.ucsc.edu.
- BLAT_(bioinformatics) isPrimaryTopicOf BLAT_(bioinformatics).
- BLAT_(bioinformatics) name "BLAT".