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- BAli-Phy abstract "BAli-Phy is a free software program for simultaneously estimating a multiple sequence alignment and its phylogenetic tree. BAli-Phy achieves high accuracy in alignment estimation by using information from the co-estimated phylogeny. BAli-Phy takes alignment uncertainty into account while estimating the phylogeny by averaging over possible alignments. Unlike most phylogeny inference software, input sequences need not be aligned beforehand. This differs from traditional approaches to alignment and phylogeny estimation, which first estimate the alignment without a high-quality tree estimate, and then estimate the tree given the alignment. BAli-Phy produces a Bayesian posterior distribution on both the alignments and the tree. The software shows uncertainty in both the alignment and the tree. BAli-Phy uses Markov chain Monte Carlo methods for estimation. It can take several days to run.".
- BAli-Phy latestReleaseVersion "2.3.7".
- BAli-Phy wikiPageExternalLink www.bali-phy.org.
- BAli-Phy wikiPageExternalLink www.bali-phy.org.
- BAli-Phy wikiPageID "41622399".
- BAli-Phy wikiPageLength "2878".
- BAli-Phy wikiPageOutDegree "17".
- BAli-Phy wikiPageRevisionID "667361894".
- BAli-Phy wikiPageWikiLink Amino_acid.
- BAli-Phy wikiPageWikiLink Apple_Macintosh.
- BAli-Phy wikiPageWikiLink Bayes_theorem.
- BAli-Phy wikiPageWikiLink Category:Bioinformatics_software.
- BAli-Phy wikiPageWikiLink Category:Computational_phylogenetics.
- BAli-Phy wikiPageWikiLink Codon.
- BAli-Phy wikiPageWikiLink FASTA_format.
- BAli-Phy wikiPageWikiLink Genetic_code.
- BAli-Phy wikiPageWikiLink Linux.
- BAli-Phy wikiPageWikiLink List_of_sequence_alignment_software.
- BAli-Phy wikiPageWikiLink MS-Windows.
- BAli-Phy wikiPageWikiLink Macintosh.
- BAli-Phy wikiPageWikiLink Markov_chain_Monte_Carlo.
- BAli-Phy wikiPageWikiLink Microsoft_Windows.
- BAli-Phy wikiPageWikiLink Multiple_sequence_alignment.
- BAli-Phy wikiPageWikiLink Newick_format.
- BAli-Phy wikiPageWikiLink Nucleotide.
- BAli-Phy wikiPageWikiLink Phylogenetic_tree.
- BAli-Phy wikiPageWikiLink Posterior_distribution.
- BAli-Phy wikiPageWikiLink Posterior_probability.
- BAli-Phy wikiPageWikiLink Sequence_alignment_software.
- BAli-Phy wikiPageWikiLink UNIX.
- BAli-Phy wikiPageWikiLink Unix.
- BAli-Phy wikiPageWikiLinkText "BAli-Phy".
- BAli-Phy developer(s)_ "Benjamin Redelings and Marc Suchard".
- BAli-Phy genre "Bioinformatics tool".
- BAli-Phy hasPhotoCollection BAli-Phy.
- BAli-Phy latestReleaseVersion "2.3".
- BAli-Phy licence "GPLv2".
- BAli-Phy name "BAli-Phy".
- BAli-Phy operatingSystem Apple_Macintosh.
- BAli-Phy operatingSystem Linux.
- BAli-Phy operatingSystem MS-Windows.
- BAli-Phy operatingSystem Macintosh.
- BAli-Phy operatingSystem Microsoft_Windows.
- BAli-Phy operatingSystem UNIX.
- BAli-Phy operatingSystem Unix.
- BAli-Phy programmingLanguage "C++".
- BAli-Phy website www.bali-phy.org.
- BAli-Phy wikiPageUsesTemplate Template:Infobox_Software.
- BAli-Phy wikiPageUsesTemplate Template:Official_website.
- BAli-Phy subject Category:Bioinformatics_software.
- BAli-Phy subject Category:Computational_phylogenetics.
- BAli-Phy hypernym Program.
- BAli-Phy type Software.
- BAli-Phy type Work.
- BAli-Phy type CreativeWork.
- BAli-Phy type Thing.
- BAli-Phy type Q386724.
- BAli-Phy type Q7397.
- BAli-Phy comment "BAli-Phy is a free software program for simultaneously estimating a multiple sequence alignment and its phylogenetic tree. BAli-Phy achieves high accuracy in alignment estimation by using information from the co-estimated phylogeny. BAli-Phy takes alignment uncertainty into account while estimating the phylogeny by averaging over possible alignments. Unlike most phylogeny inference software, input sequences need not be aligned beforehand.".
- BAli-Phy label "BAli-Phy".
- BAli-Phy sameAs m.0_8nx79.
- BAli-Phy sameAs Q15637686.
- BAli-Phy sameAs Q15637686.
- BAli-Phy wasDerivedFrom BAli-Phy?oldid=667361894.
- BAli-Phy homepage www.bali-phy.org.
- BAli-Phy isPrimaryTopicOf BAli-Phy.
- BAli-Phy name "BAli-Phy".